Index _ | A | B | C | D | E | F | G | L | M | N | O | P | R | S | T | U | V | Z _ __version__ (in module maicos) _frame_index (maicos.core.AnalysisBase attribute) _index (maicos.core.AnalysisBase attribute) _obs (maicos.core.AnalysisBase attribute) _trajectory (maicos.core.AnalysisBase attribute) _universe (maicos.core.AnalysisBase attribute) A AnalysisBase (class in maicos.core) AnalysisCollection (class in maicos.core) atomgroup (maicos.core.AnalysisBase attribute) atomgroup_header() (in module maicos.lib.util) B bin() (in module maicos.lib.util) bin_area (maicos.core.CylinderBase._obs attribute) (maicos.core.PlanarBase._obs attribute) (maicos.core.SphereBase._obs attribute) bin_edges (maicos.core.CylinderBase._obs attribute) (maicos.core.PlanarBase._obs attribute) (maicos.core.SphereBase._obs attribute) bin_pos (maicos.core.CylinderBase._obs attribute) (maicos.core.CylinderBase.results attribute) (maicos.core.PlanarBase._obs attribute) (maicos.core.PlanarBase.results attribute) (maicos.core.ProfileCylinderBase.results attribute) (maicos.core.ProfilePlanarBase.results attribute) (maicos.core.ProfileSphereBase.results attribute) (maicos.core.SphereBase._obs attribute) (maicos.core.SphereBase.results attribute) (maicos.DensityCylinder.results attribute) (maicos.DensityPlanar.results attribute) (maicos.DensitySphere.results attribute) (maicos.DielectricCylinder.results attribute) (maicos.DielectricPlanar.results attribute) (maicos.DielectricSphere.results attribute) (maicos.DiporderCylinder.results attribute) (maicos.DiporderPlanar.results attribute) (maicos.DiporderSphere.results attribute) (maicos.modules.pdfcylinder.PDFCylinder.results attribute) (maicos.PDFPlanar.results attribute) (maicos.TemperaturePlanar.results attribute) (maicos.VelocityCylinder.results attribute) (maicos.VelocityPlanar.results attribute) bin_volume (maicos.core.CylinderBase._obs attribute) (maicos.core.PlanarBase._obs attribute) (maicos.core.SphereBase.results attribute) bin_width (maicos.core.CylinderBase._obs attribute) (maicos.core.PlanarBase._obs attribute) (maicos.core.SphereBase._obs attribute) bins (maicos.PDFPlanar.results attribute) box_center (maicos.core.AnalysisBase property) (maicos.core.AnalysisBase._obs attribute) box_lengths (maicos.core.AnalysisBase property) C center_cluster() (in module maicos.lib.math) charge_neutral() (in module maicos.lib.util) citation_reminder() (in module maicos.lib.util) combine_subsample_variance() (in module maicos.lib.math) correlation() (in module maicos.lib.math) correlation_analysis() (in module maicos.lib.util) correlation_time() (in module maicos.lib.math) corrtime (maicos.core.AnalysisBase attribute) CylinderBase (class in maicos.core) D density_weights() (in module maicos.lib.weights) DensityCylinder (class in maicos) DensityPlanar (class in maicos) DensitySphere (class in maicos) deps_par (maicos.DielectricPlanar.results attribute) deps_perp (maicos.DielectricPlanar.results attribute) deps_r (maicos.DielectricCylinder.results attribute) deps_rad (maicos.DielectricSphere.results attribute) deps_z (maicos.DielectricCylinder.results attribute) DielectricCylinder (class in maicos) DielectricPlanar (class in maicos) DielectricSphere (class in maicos) diporder_weights() (in module maicos.lib.weights) DiporderCylinder (class in maicos) DiporderPlanar (class in maicos) DiporderSphere (class in maicos) DOC_DICT (in module maicos.lib.util) DOI_LIST (in module maicos.lib.util) dprofile (maicos.core.ProfileBase.results attribute) (maicos.core.ProfileCylinderBase.results attribute) (maicos.core.ProfilePlanarBase.results attribute) (maicos.core.ProfileSphereBase.results attribute) (maicos.DensityCylinder.results attribute) (maicos.DensityPlanar.results attribute) (maicos.DensitySphere.results attribute) (maicos.DiporderCylinder.results attribute) (maicos.DiporderPlanar.results attribute) (maicos.DiporderSphere.results attribute) (maicos.TemperaturePlanar.results attribute) (maicos.VelocityCylinder.results attribute) (maicos.VelocityPlanar.results attribute) E electron_count (in module maicos.lib.tables) eps_par (maicos.DielectricPlanar.results attribute) eps_par_coll (maicos.DielectricPlanar.results attribute) eps_par_self (maicos.DielectricPlanar.results attribute) eps_perp (maicos.DielectricPlanar.results attribute) eps_perp_coll (maicos.DielectricPlanar.results attribute) eps_perp_self (maicos.DielectricPlanar.results attribute) eps_r (maicos.DielectricCylinder.results attribute) eps_rad (maicos.DielectricSphere.results attribute) eps_z (maicos.DielectricCylinder.results attribute) F frames (maicos.core.AnalysisBase attribute) G get_center() (in module maicos.lib.util) get_cli_input() (in module maicos.lib.util) get_compound() (in module maicos.lib.util) get_module_input_str() (in module maicos.lib.util) L L (maicos.core.PlanarBase._obs attribute) M maicos.core module maicos.lib module maicos.lib.math module maicos.lib.tables module maicos.lib.util module maicos.lib.weights module maicos_banner() (in module maicos.lib.util) means (maicos.core.AnalysisBase attribute) module maicos.core maicos.lib maicos.lib.math maicos.lib.tables maicos.lib.util maicos.lib.weights N new_mean() (in module maicos.lib.math) new_variance() (in module maicos.lib.math) O odims (maicos.core.PlanarBase property) P pdf (maicos.PDFPlanar.results attribute) PDFCylinder (class in maicos.modules.pdfcylinder) PDFPlanar (class in maicos) phi_bins (maicos.modules.pdfcylinder.PDFCylinder.results attribute) phi_pdf (maicos.modules.pdfcylinder.PDFCylinder.results attribute) PlanarBase (class in maicos.core) pos_cyl (maicos.core.CylinderBase attribute) pos_sph (maicos.core.SphereBase attribute) profile (maicos.core.ProfileBase.results attribute) (maicos.core.ProfileCylinderBase.results attribute) (maicos.core.ProfilePlanarBase.results attribute) (maicos.core.ProfileSphereBase.results attribute) (maicos.DensityCylinder.results attribute) (maicos.DensityPlanar.results attribute) (maicos.DensitySphere.results attribute) (maicos.DiporderCylinder.results attribute) (maicos.DiporderPlanar.results attribute) (maicos.DiporderSphere.results attribute) (maicos.TemperaturePlanar.results attribute) (maicos.VelocityCylinder.results attribute) (maicos.VelocityPlanar.results attribute) ProfileBase (class in maicos.core) ProfileCylinderBase (class in maicos.core) ProfilePlanarBase (class in maicos.core) ProfileSphereBase (class in maicos.core) Python Enhancement Proposals PEP 440 R R (maicos.core.CylinderBase._obs attribute) (maicos.core.SphereBase._obs attribute) render_docs() (in module maicos.lib.util) results (maicos.core.AnalysisBase attribute) run() (maicos.core.AnalysisBase method) (maicos.core.AnalysisCollection method) (maicos.DensityCylinder method) (maicos.DensityPlanar method) (maicos.DensitySphere method) (maicos.DielectricCylinder method) (maicos.DielectricPlanar method) (maicos.DielectricSphere method) (maicos.DiporderCylinder method) (maicos.DiporderPlanar method) (maicos.DiporderSphere method) (maicos.modules.pdfcylinder.PDFCylinder method) (maicos.PDFPlanar method) (maicos.TemperaturePlanar method) (maicos.VelocityCylinder method) (maicos.VelocityPlanar method) S save() (maicos.core.AnalysisCollection method) (maicos.core.ProfileBase method) (maicos.DensityCylinder method) (maicos.DensityPlanar method) (maicos.DensitySphere method) (maicos.DielectricCylinder method) (maicos.DielectricPlanar method) (maicos.DielectricSphere method) (maicos.DiporderCylinder method) (maicos.DiporderPlanar method) (maicos.DiporderSphere method) (maicos.modules.pdfcylinder.PDFCylinder method) (maicos.PDFPlanar method) (maicos.TemperaturePlanar method) (maicos.VelocityCylinder method) (maicos.VelocityPlanar method) savetxt() (maicos.core.AnalysisBase method) scalar_prod_corr() (in module maicos.lib.math) sems (maicos.core.AnalysisBase attribute) SphereBase (class in maicos.core) sums (maicos.core.AnalysisBase attribute) symmetrize() (in module maicos.lib.math) T temperature_weights() (in module maicos.lib.weights) TemperaturePlanar (class in maicos) times (maicos.core.AnalysisBase attribute) trajectory_precision() (in module maicos.lib.util) transform_cylinder() (in module maicos.lib.math) transform_sphere() (in module maicos.lib.math) U Unit_vector (class in maicos.lib.util) unit_vectors_cylinder() (in module maicos.lib.util) unit_vectors_planar() (in module maicos.lib.util) unit_vectors_sphere() (in module maicos.lib.util) unwrap_refgroup() (in module maicos.lib.util) V velocity_weights() (in module maicos.lib.weights) VelocityCylinder (class in maicos) VelocityPlanar (class in maicos) Z z_bins (maicos.modules.pdfcylinder.PDFCylinder.results attribute) z_pdf (maicos.modules.pdfcylinder.PDFCylinder.results attribute) zmax (maicos.core.PlanarBase attribute) zmin (maicos.core.PlanarBase attribute)